Unofficial Cytoscape resources

• News
• What is csresources?
• Plug-in's
• Documents
• Tools
• Contact

News

2006-02-13

Updated the Eclipse Howto (added note at the end)

2005-11-08

pae-context plugin easier to install. Now everything needed is in the .jar file

2005-09-23

New plugin: SelConNet to select connected parts of a network.

2005-08-18

Added a tool by Junghwan Park for merging gml and sif files.

2005-07-15

pae-context plugin updated to work with Cytoscape v2.1

2005-07-14

ShortestPath plugin is now an official Cytoscape plugin! :-)

2005-07-13

Version 0.3 of the ShortestPath plugin released.

2005-07-12

New plugin ShortestPath added.

2005-06-23

Project created!

Available resources:

• pae-context plugin
• Tutorial to develop plugins with eclipse

What is csresources?

The objective of this project is to make available some extra resources to the Cytoscape tool, like some small experimental plugins that are not official plugins and some extra documentation like tutorials and some how-to's.

If you want to collaborate with this project, please contact me.

Follow this link if you want to visit the project page at SourceForge.

Plug-in's

Here the plugins hosted at this project:

• pae-context
• ShortestPath
• SelConNet

Note:

All code posted here uses LGPL licence version 2 unless explicitly said contrary.

Documents

Here the documents hosted at this project:

• How to set up Eclipse to develop Cytoscape plugins (html)

Tools

Some tools that may be useful to someone working with Cytoscape:

Conversion

• pyNetConv
• SIF+GML merger

Development

• Eclipse

Contact